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Department of Energy (DOE)

DOE financial awards are governed by 2 CFR Part 200 and 910 — requirements that demand precision and compliance. Cherry Bekaert helps you navigate these regulations with clear guidance, practical implementation support and audit-ready processes.

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Navigating DOE Funding Requirements and Compliance With Confidence

The Department of Energy (DOE) sponsors more research in the physical sciences than any other U.S. federal agency, largely through its system of National Laboratories. Of note, the Advanced Research Projects Agency-Energy (ARPA-E) is charged with promoting and funding research and development (R&D) of advanced energy technologies, modeled after the Defense Advanced Research Projects Agency (DARPA).

Navigating DOE funding requirements, including indirect cost proposals, Vendor Invoicing Portal and Electronic Reporting System (VIPERS) invoicing, Uniform Guidance audits and quarterly reporting, requires a disciplined approach and well-documented processes. Cherry Bekaert helps DOE grant and contract recipients strengthen compliance frameworks, streamline financial reporting, and manage indirect costs with confidence, reducing risk while supporting efficient project execution.

Stay Compliant. Stay Funded. Stay Ahead.

Identify gaps, clarify requirements, and move forward with a more controlled, audit-ready approach to DOE funding.

DOE Contract and Financial Assistance Awards

DOE funding vehicles provide critical capital for organizations advancing cutting-edge technologies and scientific discoveries, ranging from traditional procurement contracts to research grants and cooperative agreements. Each award type carries distinct administrative and compliance obligations that require disciplined financial management and specialized federal funding knowledge.

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Federal Contract Awards

Federal Contract Awards, which include procurement contracts used to buy goods or services (which are very similar to DoD contracts)

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Federal Financial Assistance Awards

Federal Financial Assistance Awards, which include grants, cooperative agreements and sub-awards (which are very similar to NIH grants). ARPA-Es, EEREs and SBIR/STTRs which are awarded as grants or cooperative agreements may or may not contain cost sharing provisions.

DOE Award Oversight – 2 CFR Part 200 and 910

Annual Indirect Cost Proposal

Most of DOE’s funding vehicles require this annual report, which is nearly identical to the Department of Defense (DoD) annual incurred cost submission.

Under-spending on indirect costs during the life of the funding award may be re-budgeted and spent on direct expenses on the project or must be repatriated when the award is closed out. However, funds are generally not provided for indirect cost overruns, so it is critical to monitor indirect cost and total award spending.

Contract and Cooperative Agreements

VIPERS is the DOE’s centralized e-invoicing tool administered with the Oak Ridge Financial Service Center. During the VIPERS submission process, users must check a box to "Certify and Submit," legally affirming that all items in the invoice are true and accurate. Making materially false statements, fictitious claims, or fraudulent alterations on a government invoice is a federal crime.

Financial Reports (SF-425)

Funds drawn down from a DOE payment system must be reconciled to actual project funding earned and reported quarterly on the Federal Financial Report (FFR), also known as the SF-425.

When signing the SF-425, you are legally certifying:

  • Accurate Spending: The amounts you reported for direct and indirect expenditures match your organization's actual financial records.
  • True Balances: Figures for cash receipts, disbursements and unliquidated obligations are correct.
  • Compliance: You are following the federal cost principles and rules dictated by the granting agency.

Line 13 Federal Financial Form SF 425

Annual Audit of For-profit Recipients – 2 CFR Part 910, Subpart F

Under Regulation 2 CFR 910.501, when a for-profit DOE recipient has expended more than $1M for its fiscal year, a Uniform Guidance Audit (UGA) must be performed. This audit is identical to a NIH Uniform Guidance Audit and includes compliance tests, tests of internal controls and audit follow-up on prior audit findings. The audit report is due nine months after the recipient’s fiscal year end.

Annual Property Inventories

Similar to an NIH grant, the determination of ownership and disposition of property acquired with government funding, and charged as a direct cost, must be accounted for on an annual basis on the Financial Assistance Property Closeout Certification report.

Benefits of Using Cherry Bekaert for Your DOE Funding Needs

DOE funding brings significant opportunity, but also complex compliance and reporting requirements. By choosing Cherry Bekaert, you gain access to experienced advisors who provide specialized accounting and compliance support to help strengthen audit readiness, maintain compliance, and confidently manage federal funding requirements so you can stay focused on innovation and growth. 

“Cherry Bekaert combines specialized DOE accounting and compliance knowledge with experienced advisory support to help your company confidently navigate the complexities of federal funding. By taking the time to understand your unique goals and requirements, we deliver tailored solutions that support compliance, strengthen audit readiness, and help you maximize the value of your DOE award while focusing on innovation and sustainable growth.”
Ed Jameson
Government Contracting Leader

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Ed Jameson

Government Contracting Leader

Partner, Cherry Bekaert Advisory LLC

Bryan Cohen

Outsourced Accounting Services

Partner, Cherry Bekaert Advisory LLC

DOE Contracts and Grants Consulting FAQs

DOE grants and contracts often require specialized accounting practices, including quarterly SF-425 reporting, annual audits and compliance with applicable federal regulations. Maintaining compliant accounting systems and accurate financial records is critical to successfully managing DOE funding. 

Compliance helps DOE-funded grant and contract recipients meet federal reporting and accounting requirements, prepare for audits and maintain accountability over federal funds. A compliant accounting system can help reduce the risk of costly audit findings and reporting issues.

Cherry Bekaert provides specialized accounting and compliance support for companies receiving DOE funding. Our experienced advisors help clients navigate federal accounting requirements, strengthen audit readiness and maintain compliance with the regulations associated with government awards. 

The SF-425, also known as the Federal Financial Report, is a financial reporting requirement associated with many federal awards. DOE-funded organizations may be required to submit SF-425 reports to demonstrate how grant funds have been used and managed. 

Strong financial controls, accurate documentation and a compliant accounting system are important components of audit readiness. Experienced accounting support can help your company maintain compliance and prepare for annual audits associated with DOE funding. 

Companies receiving DOE funding, including those supported through programs such as ARPA-E and EERE, can benefit from specialized accounting and compliance support designed to address federal reporting, audit, and accounting requirements.

Cherry Bekaert combines specialized government grant and contract accounting knowledge with experienced advisors who understand the unique requirements associated with federal funding. Our team helps organizations maintain compliance, strengthen audit readiness, and confidently manage DOE funding requirements. 

A compliant accounting system can help you track costs, maintain accountability for federal funds, support reporting requirements, and provide greater visibility into financial performance. This foundation can help you manage DOE awards with greater confidence.

Outsourced accounting support can provide access to experienced CPAs, specialized government funding knowledge, and scalable accounting solutions that help you maintain compliance while staying focused on innovation and growth.

Look for advisors with experience supporting federal grant and contract recipients, knowledge of government accounting requirements, and the ability to provide practical compliance, reporting, and audit readiness support throughout the award lifecycle.

Contact Our DOE Consulting Team